PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN05853.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 372aa    MW: 40998.3 Da    PI: 6.8455
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN05853.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.16.5e-13180226354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++ +k+L
  KHN05853.1 180 KSHSEAERRRRERINNHLAKLRSLLPNT-----TKTDKASLLAEVIQQVKEL 226
                 79*************************9.....8***********9988887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.679177226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.6E-10180226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-13181236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.54E-14181234IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.2E-12183232IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.74E-4190229No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MKKELEDHGQ CSSPPIINNN IQSYKEHLLL QQQMQQNSDI FGGGGGSKGL MFPPEVVSSI  60
LQQQPWSIPP VPSFNPNPVH YNNTNPVHLH EQASSFLVPP PTTTPSPYAS FFSSRRVVPS  120
LHFAYEGPSS HHDHHHLRII SDTLGPMVQP GSAAPFGLQA ELGKMTAQEI MEAKALAASK  180
SHSEAERRRR ERINNHLAKL RSLLPNTTKT DKASLLAEVI QQVKELKRQT SLIVEMSTVP  240
TESDELTVDA IDEDGKFVIK ASLCCEDRSD LLPDLIKTLK ALRLRTLRAE ITSLGGRVKN  300
VLVITGDEEE NSNTNNGEQS MQQQYCISSI QEALKAVMEK SGGGDESASG NVKRQRTTTT  360
NNKINILEQS SL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1185190ERRRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003520049.10.0PREDICTED: transcription factor bHLH30-like
SwissprotQ9S7Y11e-112BH030_ARATH; Transcription factor bHLH30
TrEMBLA0A0B2PDY90.0A0A0B2PDY9_GLYSO; Transcription factor bHLH30
STRINGGLYMA02G11190.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45893458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.13e-90bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]